Fluorescent pseudomonads from plant rhizosphere as biological agent to control white root disease and growth-promoting on rubber plants
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Abstract. Marwan H, Mulyati S, Sarman S, Hayati I. 2020. Fluorescent pseudomonads from plant rhizosphere as biological agents to control white root disease and growth-promoting on rubber plants. Biodiversitas 21: 5338-5343. White root disease (Rigidoporus lignosus) is a serious problem of rubber plantation in Indonesia, including in Sumatera. The fungal infection is often difficult to detect, infection develops rapidly and can cause plant death if left untreated since the early stage, and thus using biological agents might be an efficient way to overcome the disease. This research was aimed to explore fluorescent pseudomonads from rubber plant rhizosphere that can inhibit the growth of the fungal pathogen, characterize fluorescent pseudomonads isolated as biological control agent and plant growth promoter, and apply the isolate to rubber plants to control the disease and growth of plants. Twelve out of the 76 fluorescent pseudomonads isolated from several rhizospheres of rubber plants were found to be antagonistic to white root fungi. Fluorescent pseudomonads have various characteristics such as chitinolytic activity, phosphate solvent, and nitrogen fixation. The application of the antagonistic isolates on rubber seedlings was able to increase growth and suppress the colonization of R. lignosus on rubber plant roots.
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References
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Haas D & Defago G (2005) Biological control of soil-borne pathogens by fluorescent pseudomonads. Nat Rev Microbiol 4: 307–319
Hernández-Leon R, Daniel Rojas-Solís, Miguel Contreras-Pérez, Ma. del Carmen Orozco-Mosqueda, Lourdes I. Macías-Rodríguez, Homero Reyes-de la Cruz, Eduardo Valencia-Cantero, Gustavo Santoyo. Characterization of the antifungal and plant growth-promoting effects of diffusible and volatile organic compounds produced by Pseudomonas fluorescens strains. Biological Control 81 : 83 – 92.
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Nihorimbere V, Ongena M, Smargiassi M, Thonart P. 2011. Beneficial effect of the rhizosphere microbial community for plant growth and health. Biotechnology, Agronomy and Society and Environment 15(2):327-337
Paul DP & Sinha SN. 2017. Isolation and characterization of phosphate solubilizing bacterium Pseudomonas aeruginosa KUPSB12 with antibacterial potential from river Ganga, India. Annals of Agrarian Science, 15 (1) : 130-136.
Pierson LS, III, Pierson EA. 2007. Roles of diffusible signals in communication among plant-associated bacteria. Phytopathology 97:227- 232.
Pieterse CM, Zamioudis C, Berendsen RL, Weller DM, Van Wees SC, Bakker PA. 2014. Induced systemic resistance by beneficial microbes. Annu Rev Phytopathol 52: 347-375.
Podile AR, Kishore GK. 2006. Plant growth-promoting rhizobacteria. In: Gnanamanickam SS (ed) Plant-Associated Bacteria. Springer, Netherlands, pp 195-230.
Ross IL, Alami Y, Harvey PR, Achouak W, Ryder MH. 2000. Genetic diversity and biological control activity of novel species of closely related pseudomonads isolated from wheat field soils in South Australia. Appl. Environ. Microbiol. 66:1609-1616.
Schroth MN & Hancock JG. 1982. Disease-suppressive soil and root-colonizing bacteria. Science 216:1376-1381.
van den Broek D, Chin-A-Woeng TFC, Eijkemans K, Mulders IHM, Bloemberg GV, Lugtenberg BJ. 2003. Biocontrol traits of Pseudomonas spp. are regulated by phase variation. Mol. Plant-Microbe Interact. 16:1003-1012.
Zaidi A, Khan MS, Ahemad M, Oves M. 2009. Plant growth promotion by phosphate solubilizing bacteria. Acta Microbiol Immunol Hung 56: 263-284.
Zou XH, Nonogaki H, Welbaum GE. 2002. A gel diffusion assay for visualization and quantification of chitinase activity. Journal of Molecular Biotechnology 22(1):19-27.
Beneduzi A, Adriana A, Luciane MPP. 2012. Plant growth-promoting rhizobacteria (PGPR): Their potential as antagonists and biocontrol agents. Genetics and Molecular Biology 35 (4) : 1044-1051
Bhattacharyya PN & Jha DK (2012) Plant growth-promoting rhizobacteria (PGPR): emergence in agriculture. World J Microbiol Biotechnol 28: 1327-1350.
Directorat General of Plantation. 2016. JAP Control on Rubber Plants in Indonesia with 2016 State Budget Fund. Article Technology, Ministry of Agriculture. Jakarta. http://dirjenbun.pertanian.go.id on 17th July 2020.
Dobbelaere S, Vanderleyden J, Okon Y (2003) Plant growth-promoting effects of diazotrophs in the rhizosphere. CRC Crit Rev Plant Sci 22:107-149.
Edi-Premono M, Moawad AM, Vlek PLG, 1 9 9 6 . Effect of phosphate-solubilizing Pseudomonas putida on the growth of maize and its survival in the rhizosphere. Indonesian J. Crop Sci., 11: 13-23.
Fravel DR. 2005. Commercialization and implementation of biocontrol. Annu Rev Phytopathol 43:337–359
Gray EJ, & Smith DL. (2005). Intracellular and extracellular PGPR: Commonalities and distinctions in the plant-bacterium signaling processes. Soil Biology Biochemistry 37:395-412.
Haas D & Defago G (2005) Biological control of soil-borne pathogens by fluorescent pseudomonads. Nat Rev Microbiol 4: 307–319
Hernández-Leon R, Daniel Rojas-Solís, Miguel Contreras-Pérez, Ma. del Carmen Orozco-Mosqueda, Lourdes I. Macías-Rodríguez, Homero Reyes-de la Cruz, Eduardo Valencia-Cantero, Gustavo Santoyo. Characterization of the antifungal and plant growth-promoting effects of diffusible and volatile organic compounds produced by Pseudomonas fluorescens strains. Biological Control 81 : 83 – 92.
Kamilova F, Validov S, Azarova T, Mulders I, Lugtenberg B. 2005. Enrichment for enhanced competitive plant root tip colonizers selects for a new class of biocontrol bacteria. Environ Microbiol 7, 1809–1817.
Khaeruni A, Sutariati GAK, Wahyuni S. 2010. Characterization and activities assay of rhizosphere bacteria from ultisol land for plant-growth promoting and biocontrol agents of soil-borne fungus pathogens under in vitro test. J HPT Trop 10 (2) : 123-30.
Manikandan R, Saravanakumar D, Rajendran L, Raguchander T, Samiyappan R. 2010. Standardization of liquid formulation of Pseudomonas fluorescens Pf1 for its efficacy against Fusarium wilt of tomato. Biol. Cont. 30:1-8.
Mia MB, Shamsuddin Z, Mahmood M. 2010. Use of plant growth promoting bacteria in banana: a new insight for sustainable banana production. Int. J. Agric. Biol., 12 (3) : 459-467
Mohd FA, Lee SS, Maziah Z, Patahayah M. 2009. Pathogenicity of Rigidoporus microporus and Phellinus noxius against four major plantation tree species in Peninsular Malaysia. Journal of Tropical Forest Science 21: 289–298.
Nandakumar R, Babu S, Viswanathan R, Raguchander T, Samiyappan R. 2001. Induction of systemic resistance in rice against sheath blight disease by plant growth promoting rhizobacteria. Soil. Biol. Biochem. 33:603-612.
Nandris D, Nicole M, Geiger JP. 1987. Root rot diseases of rubber trees. Plant Dis. 71: 298-306.
Nicole M, Geiger JP, Nandris D. 1985. Variability among Africa populations of Rigidoporus lignosus and Phellinus noxius, Eur. J. for. Pathol. 15: 293 -300.
Nihorimbere V, Ongena M, Smargiassi M, Thonart P. 2011. Beneficial effect of the rhizosphere microbial community for plant growth and health. Biotechnology, Agronomy and Society and Environment 15(2):327-337
Paul DP & Sinha SN. 2017. Isolation and characterization of phosphate solubilizing bacterium Pseudomonas aeruginosa KUPSB12 with antibacterial potential from river Ganga, India. Annals of Agrarian Science, 15 (1) : 130-136.
Pierson LS, III, Pierson EA. 2007. Roles of diffusible signals in communication among plant-associated bacteria. Phytopathology 97:227- 232.
Pieterse CM, Zamioudis C, Berendsen RL, Weller DM, Van Wees SC, Bakker PA. 2014. Induced systemic resistance by beneficial microbes. Annu Rev Phytopathol 52: 347-375.
Podile AR, Kishore GK. 2006. Plant growth-promoting rhizobacteria. In: Gnanamanickam SS (ed) Plant-Associated Bacteria. Springer, Netherlands, pp 195-230.
Ross IL, Alami Y, Harvey PR, Achouak W, Ryder MH. 2000. Genetic diversity and biological control activity of novel species of closely related pseudomonads isolated from wheat field soils in South Australia. Appl. Environ. Microbiol. 66:1609-1616.
Schroth MN & Hancock JG. 1982. Disease-suppressive soil and root-colonizing bacteria. Science 216:1376-1381.
van den Broek D, Chin-A-Woeng TFC, Eijkemans K, Mulders IHM, Bloemberg GV, Lugtenberg BJ. 2003. Biocontrol traits of Pseudomonas spp. are regulated by phase variation. Mol. Plant-Microbe Interact. 16:1003-1012.
Zaidi A, Khan MS, Ahemad M, Oves M. 2009. Plant growth promotion by phosphate solubilizing bacteria. Acta Microbiol Immunol Hung 56: 263-284.
Zou XH, Nonogaki H, Welbaum GE. 2002. A gel diffusion assay for visualization and quantification of chitinase activity. Journal of Molecular Biotechnology 22(1):19-27.
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